PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0140319.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family TCP
Protein Properties Length: 307aa    MW: 33945.1 Da    PI: 8.709
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0140319.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP111.89.9e-3520129289
              TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...........ssssasec..eaesssssa 82 
                      +g+kdrhsk+hT++g+RdRRvRl a++a++f+ +qd+LG+d++sk+ +WL+++akp+i++l++            ++s +s+c     + +++ 
  Lj0g3v0140319.1  20 TGRKDRHSKVHTSKGPRDRRVRLAAHTAIEFYHVQDRLGYDRPSKAMDWLIKKAKPSIDKLVEAqsagssgmaigEQSESSSCynF--QLQKQL 111
                      79**************************************************************5555555555433333444321..222222 PP

              TCP  83 snsssg................k 89 
                           g                +
  Lj0g3v0140319.1 112 -----GdnpasstnnstqdfglS 129
                      .....111111122222233330 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.6E-3120121IPR005333Transcription factor, TCP
PROSITE profilePS5136929.8122280IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MKSTVGEINE VEGGHFVRST GRKDRHSKVH TSKGPRDRRV RLAAHTAIEF YHVQDRLGYD  60
RPSKAMDWLI KKAKPSIDKL VEAQSAGSSG MAIGEQSESS SCYNFQLQKQ LGDNPASSTN  120
NSTQDFGLSL NSFQHHPGLI PWQSQQGGEN HAASNEHQTF FAGSTDPVGF RNHYHQRILT  180
WNWNNEATSD HVNKVGFKVN SEQFLGQGSC SAYSRSGTTL QPSFSTSVRA WNDIPMASSD  240
HHHRSQTLHQ ASIFRSRFLP DEGVVRFGNI SDKIQGEEEN NGVAPNKPSS ASPSSHHSPQ  300
KAEHSNG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004505518.11e-106PREDICTED: transcription factor TCP4
TrEMBLA0A0L9ULH91e-105A0A0L9ULH9_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SHM31e-105A0A0S3SHM3_PHAAN; Uncharacterized protein
STRINGGLYMA13G36840.21e-101(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF116334105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.11e-39TCP domain protein 10